Check file names with RegEx in ImageJ
Posted 26th July 2019
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Use regular expressions to apply different steps in an ImageJ macro script by querying the file name.
Run an ImageJ batch processing macro in “headless” mode
Posted 23rd October 2018
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Instructions for running an ImageJ macro script in “headless” mode via the command prompt in Windows.
Make ImageJ 1.x work in the background
Posted 22nd October 2018
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Run ImageJ macro scripts in “batch mode” to improve performance and allow images to be processed in the background.
Run an ImageJ macro directly from GitHub Gist
Posted 23rd May 2018
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Simple code that enables you to host your ImageJ macro scripts on GitHub Gist but execute them from a local machine.
Timestamp generation as a string in ImageJ macros
Posted 20th March 2018
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Generate a timestamp in the format yyyyMMddhhmmss within a macro for ImageJ.
An ImageJ batch processing macro that works
Posted 15th March 2017
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A helpful generic ImageJ macro script that can be used to loop through files of type in a selected directory and then do something to them.